NikolajDanger/meow_base
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Added Pipeconnection for Windows and os.path.join, rather than hardcoded path combine

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toppggg
2023-02-08 14:32:16 +01:00
parent d787e37adc
commit 37d061b06a
3 changed files with 34 additions and 14 deletions
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24
tests/test_runner.py
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@ -121,10 +121,10 @@ class MeowTests(unittest.TestCase):
# Test single meow papermill job execution
def testMeowRunnerPapermillExecution(self)->None:
pattern_one = FileEventPattern(
"pattern_one", "start/A.txt", "recipe_one", "infile",
"pattern_one", os.path.join("start","A.txt"), "recipe_one", "infile",
parameters={
"extra":"A line from a test Pattern",
"outfile":"{VGRID}/output/{FILENAME}"
"outfile":os.path.join("{VGRID}","output","{FILENAME}")
})
recipe = JupyterNotebookRecipe(
"recipe_one", APPENDING_NOTEBOOK)
@ -205,16 +205,16 @@ class MeowTests(unittest.TestCase):
# Test meow papermill job chaining within runner
def testMeowRunnerLinkedPapermillExecution(self)->None:
pattern_one = FileEventPattern(
"pattern_one", "start/A.txt", "recipe_one", "infile",
"pattern_one", os.path.join("start","A.txt"), "recipe_one", "infile",
parameters={
"extra":"A line from Pattern 1",
"outfile":"{VGRID}/middle/{FILENAME}"
"outfile":os.path.join("{VGRID}","middle","{FILENAME}")
})
pattern_two = FileEventPattern(
"pattern_two", "middle/A.txt", "recipe_one", "infile",
"pattern_two", os.path.join("middle","A.txt"), "recipe_one", "infile",
parameters={
"extra":"A line from Pattern 2",
"outfile":"{VGRID}/output/{FILENAME}"
"outfile":os.path.join("{VGRID}","output","{FILENAME}")
})
recipe = JupyterNotebookRecipe(
"recipe_one", APPENDING_NOTEBOOK)
@ -314,10 +314,10 @@ class MeowTests(unittest.TestCase):
# Test single meow python job execution
def testMeowRunnerPythonExecution(self)->None:
pattern_one = FileEventPattern(
"pattern_one", "start/A.txt", "recipe_one", "infile",
"pattern_one", os.path.join("start","A.txt"), "recipe_one", "infile",
parameters={
"num":10000,
"outfile":"{VGRID}/output/{FILENAME}"
"outfile":os.path.join("{VGRID}","output","{FILENAME}")
})
recipe = PythonRecipe(
"recipe_one", COMPLETE_PYTHON_SCRIPT
@ -403,16 +403,16 @@ class MeowTests(unittest.TestCase):
# Test meow python job chaining within runner
def testMeowRunnerLinkedPythonExecution(self)->None:
pattern_one = FileEventPattern(
"pattern_one", "start/A.txt", "recipe_one", "infile",
"pattern_one", os.path.join("start","A.txt"), "recipe_one", "infile",
parameters={
"num":250,
"outfile":"{VGRID}/middle/{FILENAME}"
"outfile":os.path.join("{VGRID}","middle","{FILENAME}")
})
pattern_two = FileEventPattern(
"pattern_two", "middle/A.txt", "recipe_one", "infile",
"pattern_two", os.path.join("middle","A.txt"), "recipe_one", "infile",
parameters={
"num":40,
"outfile":"{VGRID}/output/{FILENAME}"
"outfile":os.path.join("{VGRID}","output","{FILENAME}")
})
recipe = PythonRecipe(
"recipe_one", COMPLETE_PYTHON_SCRIPT