NikolajDanger/meow_base
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rewored rules to only invoke base rule, and added bash jobs

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PatchOfScotland
2023-03-30 11:33:15 +02:00
parent 747f2c316c
commit 311c98f7f2
20 changed files with 1046 additions and 373 deletions
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82
tests/shared.py
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@ -46,34 +46,36 @@ def backup_before_teardown(backup_source:str, backup_dest:str):
copy_tree(backup_source, backup_dest)
# Recipe funcs
BAREBONES_PYTHON_SCRIPT = [
# Bash scripts
BAREBONES_BASH_SCRIPT = [
""
]
COMPLETE_PYTHON_SCRIPT = [
"import os",
"# Setup parameters",
"num = 1000",
"infile = 'somehere"+ os.path.sep +"particular'",
"outfile = 'nowhere"+ os.path.sep +"particular'",
"",
"with open(infile, 'r') as file:",
" s = float(file.read())",
""
"for i in range(num):",
" s += i",
"",
"div_by = 4",
"result = s / div_by",
"",
"print(result)",
"",
"os.makedirs(os.path.dirname(outfile), exist_ok=True)",
"",
"with open(outfile, 'w') as file:",
" file.write(str(result))",
"",
"print('done')"
COMPLETE_BASH_SCRIPT = [
'#!/bin/bash',
'',
'num=1000',
'infile="data"',
'outfile="output"',
'',
'echo "starting"',
'',
'read var < $infile',
'for (( i=0; i<$num; i++ ))',
'do',
' var=$((var+i))',
'done',
'',
'div_by=4',
'echo $var',
'result=$((var/div_by))',
'',
'echo $result',
'',
'mkdir -p $(dirname $outfile)',
'',
'echo $result > $outfile',
'',
'echo "done"'
]
# Jupyter notebooks
@ -1225,6 +1227,34 @@ GENERATOR_NOTEBOOK = {
}
# Python scripts
BAREBONES_PYTHON_SCRIPT = [
""
]
COMPLETE_PYTHON_SCRIPT = [
"import os",
"# Setup parameters",
"num = 1000",
"infile = 'somehere"+ os.path.sep +"particular'",
"outfile = 'nowhere"+ os.path.sep +"particular'",
"",
"with open(infile, 'r') as file:",
" s = float(file.read())",
""
"for i in range(num):",
" s += i",
"",
"div_by = 4",
"result = s / div_by",
"",
"print(result)",
"",
"os.makedirs(os.path.dirname(outfile), exist_ok=True)",
"",
"with open(outfile, 'w') as file:",
" file.write(str(result))",
"",
"print('done')"
]
IDMC_UTILS_MODULE = [
"import matplotlib.pyplot as plt",
"from sklearn import mixture",