standardised naming of test recipe scripts
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@ -1255,7 +1255,7 @@ COMPLETE_PYTHON_SCRIPT = [
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"",
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"print('done')"
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]
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IDMC_UTILS_MODULE = [
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IDMC_UTILS_PYTHON_SCRIPT = [
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"import matplotlib.pyplot as plt",
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"from sklearn import mixture",
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"import numpy as np",
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@ -1364,7 +1364,7 @@ IDMC_UTILS_MODULE = [
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" else:",
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" return means, stds, weights"
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]
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GENERATE_SCRIPT = [
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GENERATE_PYTHON_SCRIPT = [
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"import numpy as np",
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"import random",
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"import foam_ct_phantom.foam_ct_phantom as foam_ct_phantom",
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@ -1391,7 +1391,9 @@ GENERATE_SCRIPT = [
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" np.save(filename, dataset)",
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" del dataset"
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]
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COUNTING_PYTHON_SCRIPT = [
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]
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valid_pattern_one = FileEventPattern(
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"pattern_one", "path_one", "recipe_one", "file_one")
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@ -28,8 +28,8 @@ from meow_base.recipes.python_recipe import PythonHandler, PythonRecipe
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from shared import TEST_JOB_QUEUE, TEST_JOB_OUTPUT, TEST_MONITOR_BASE, \
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MAKER_RECIPE, APPENDING_NOTEBOOK, COMPLETE_PYTHON_SCRIPT, TEST_DIR, \
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FILTER_RECIPE, POROSITY_CHECK_NOTEBOOK, SEGMENT_FOAM_NOTEBOOK, \
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GENERATOR_NOTEBOOK, FOAM_PORE_ANALYSIS_NOTEBOOK, IDMC_UTILS_MODULE, \
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TEST_DATA, GENERATE_SCRIPT, setup, teardown, backup_before_teardown
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GENERATOR_NOTEBOOK, FOAM_PORE_ANALYSIS_NOTEBOOK, IDMC_UTILS_PYTHON_SCRIPT, \
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TEST_DATA, GENERATE_PYTHON_SCRIPT, setup, teardown, backup_before_teardown
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pattern_check = FileEventPattern(
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"pattern_check",
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@ -1020,11 +1020,11 @@ class MeowTests(unittest.TestCase):
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foam_data_dir = os.path.join(TEST_MONITOR_BASE, "foam_ct_data")
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make_dir(foam_data_dir)
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write_file(lines_to_string(IDMC_UTILS_MODULE),
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write_file(lines_to_string(IDMC_UTILS_PYTHON_SCRIPT),
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os.path.join(TEST_MONITOR_BASE, "idmc_utils_module.py"))
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gen_path = os.path.join(TEST_MONITOR_BASE, "generator.py")
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write_file(lines_to_string(GENERATE_SCRIPT), gen_path)
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write_file(lines_to_string(GENERATE_PYTHON_SCRIPT), gen_path)
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u_spec = importlib.util.spec_from_file_location("gen", gen_path)
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gen = importlib.util.module_from_spec(u_spec)
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@ -1145,11 +1145,11 @@ class MeowTests(unittest.TestCase):
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foam_data_dir = os.path.join(TEST_MONITOR_BASE, "foam_ct_data")
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make_dir(foam_data_dir)
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write_file(lines_to_string(IDMC_UTILS_MODULE),
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write_file(lines_to_string(IDMC_UTILS_PYTHON_SCRIPT),
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os.path.join(TEST_MONITOR_BASE, "idmc_utils_module.py"))
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gen_path = os.path.join(TEST_MONITOR_BASE, "generator.py")
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write_file(lines_to_string(GENERATE_SCRIPT), gen_path)
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write_file(lines_to_string(GENERATE_PYTHON_SCRIPT), gen_path)
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all_data = [1000] * good + [100] * big + [10000] * small
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shuffle(all_data)
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@ -1303,11 +1303,11 @@ class MeowTests(unittest.TestCase):
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foam_data_dir = os.path.join(TEST_MONITOR_BASE, "foam_ct_data")
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make_dir(foam_data_dir)
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write_file(lines_to_string(IDMC_UTILS_MODULE),
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write_file(lines_to_string(IDMC_UTILS_PYTHON_SCRIPT),
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os.path.join(TEST_MONITOR_BASE, "idmc_utils_module.py"))
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gen_path = os.path.join(TEST_MONITOR_BASE, "generator.py")
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write_file(lines_to_string(GENERATE_SCRIPT), gen_path)
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write_file(lines_to_string(GENERATE_PYTHON_SCRIPT), gen_path)
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all_data = [1000] * good + [100] * big + [10000] * small
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shuffle(all_data)
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@ -1455,11 +1455,11 @@ class MeowTests(unittest.TestCase):
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foam_data_dir = os.path.join(TEST_MONITOR_BASE, "foam_ct_data")
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make_dir(foam_data_dir)
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write_file(lines_to_string(IDMC_UTILS_MODULE),
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write_file(lines_to_string(IDMC_UTILS_PYTHON_SCRIPT),
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os.path.join(TEST_MONITOR_BASE, "idmc_utils_module.py"))
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gen_path = os.path.join(TEST_MONITOR_BASE, "generator.py")
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write_file(lines_to_string(GENERATE_SCRIPT), gen_path)
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write_file(lines_to_string(GENERATE_PYTHON_SCRIPT), gen_path)
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all_data = [1000] * good + [100] * big + [10000] * small
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shuffle(all_data)
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